Software

Software from the MFGL

WhichRun Bayes (v4.2) - software for assigning individuals to populations (or runs, for salmon)

WhichLoci (v1.0) - program for determining descriminatory power among candidate genetic loci

P-LOCI - determines the most efficient set of codominant markers for assigning parentage

Other Useful Software

Genetix -

FSTAT - tests gene diversities and differentiation statistics from codominant genetic markers

SPAM - Statistics Program for Analyzing Mixtures

PARTITION - identifies population sub-division and assigns individuals to populations

STRUCTURE - uses multi-locus genotype data to investigate population structure

GMA - Software for estimating the stock proportions within mixed stock fisheries

Cervus - program designed for large-scale parentage analysis using co-dominant loci

Relatedness and Kinship - Programs for population genetic and relatedness calculations

Fuzzy Correspondence Analysis - describes how to run FCA in ADE-4

GENEPOP - program for running a variety of population genetic analyses

Arlequin - software for population genetic data analysis

GENECLASS -

LEA -

TREEVIEW - tree drawing software for Macintosh, Windows, Linux, and Unix

PHYLIP - a package of programs for inferring phylogenies

Probmax - program for parentage assignment

FaMoz - a program for parentage studies